| Chachoan Airport | Tungurahua | Ambato, Ecuador | Public/Military |
| Chimborazo Airport | Chimborazo | Riobamba, Ecuador | Public |
| Ciudad de Catamayo Airport | Loja | Catamayo, Ecuador | Public |
| Colonel Carlos Concha Torres Airport | Esmeraldas | Esmeraldas, Ecuador | Public |
| Cotopaxi International Airport | Cotopaxi | Ecuador | Public/Military |
| Edmundo Carvajal Airport | Morona-Santiago | Amazonas y Macas, Cuenca 140501, Ecuador | Public |
| El Carmen Airport | Pastaza | Catamayo, Ecuador | Military |
| Eloy Alfaro International Airport/Eloy Alfaro Air Base | Manabi | Manta, Ecuador | Public/Military |
| Francisco de Orellana Airport | Orellana | Francisco de Orellana, Ecuador | Public |
| General Ulpiano Paez Airport/Salinas Air Base | Santa Elena | Salinas, Ecuador | Public/Military |
| General Villamil Airport | Galapagos | | Public |
| Gualaquiza Airport | Morona-Santiago | Gualaquiza, Ecuador | Public |
| Jose Joaquin de Olmedo International Airport/Simon Bolivar Air Base | Guayas | Av. de las Americas, Guayaquil 090513, Ecuador | Public |
| Jose Maria Velasco Ibarra Airport | Loja | Macara, Ecuador | Public |
| Jumandy Airport | Napo | Ahuano, Ecuador | Public |
| Lago Agrio Airport | Sucumbios | Balsas 220, Nueva Loja 210203, Ecuador | Public |
| Los Perales Airport | Manabi | Ruta del Spondylus, San Vicente, Ecuador | Public |
| Mariscal Lamar Airport | Azuay | Av. Espana, Cuenca 010107, Ecuador | Public |
| Mariscal Sucre International Airport/Mariscal Sucre Air Base | Galapagos | Tababela Parish S/N via Yaruqui, Quito, Ecuador | Public |
| Putumayo Airport | Sucumbios | | Public |
| Rio Amazonas Airport | Pastaza | | Public |
| San Cristobal Airport | Galapagos | Puerto Baquerizo Moreno, Ecuador | Public |
| Santa Cecilia Airport | | Nueva Loja, Ecuador | Public |
| Santa Rosa Airport | Galapagos | Santa Rosa, Ecuador | Public |
| Seymour Airport | Galapagos | Aeropuerto Seymour de Baltra, Isla Baltra Baltra, Seymour, Ecuador | Public/Military |
| Sucua Airport | Morona-Santiago | Amazonas y Macas, Cuenca 140501, Ecuador | Public |
| Taisha Airport | Morona-Santiago | Taisha, Ecuador | Public |
| Tarapoa Airport | Sucumbios | Tarapoa, Ecuador | Public |
| Taura Air Base | Guayas | Ingreso Base Aerea Taura, Ecuador | Military |
| Teniente Coronel Luis A. Mantilla International Airport | Galapagos | Tulcan, Ecuador | Public |
| Tiputini Airport | Orellana | Tiputini, Ecuador | Public |
